Check all the tie rods, bushings, endlinks and that everything is properly tight.
Loosen everything and tighten with the car on the ground at ride height.
Double check you ride height that it's perfectly even.
Make sure your rotors and wheels are seating properly.
Swap the wheels around doing some testing.
Did you get to see the alignment printouts to compare and verify, it was a 4 wheel alignment?
Borrow a set of wheels tires off of a friend/coworker/forum member for a few days of testing.
2008 135i - MHD/JB4, MS DP's, AMS IC, UI CAI, CDV delete, M3 control arms/Links, RE Toe Link, ECS Trailing Arm, M3 rear SF & Trans bushings, SS brake lines, Michelin PSS.